mESAdb: miRNA sequence and expression database


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You may find the articles and their supplementary data files on this page used in Konu Lab microRNA expression and sequence database project: mESAdb.

*You may download our supporting material from here.

*Measuring microRNAs: comparisons of microarray and quantitative PCR measurements, and of different total RNA prep methods. Ach RA, Wang H, Curry B. BMC Biotechnol 2008 Sep 11;8:69. Ach Supplementary Data

*MicroRNA expression detected by oligonucleotide microarrays: system establishment and expression profiling in human tissues. Barad O, Meiri E, Avniel A, Aharonov R, Barzilai A, Bentwich I, Einav U, Gilad S, Hurban P, Karov Y, Lobenhofer EK, Sharon E, Shiboleth YM, Shtutman M, Bentwich Z, Einat P. Genome Res. 2004 Dec;14(12):2486-94. Barad Supplementary Data (*Tissue expression data (MS Excel))

*Microarray profiling of microRNAs and mouse miRNA reveals frequent coexpression with neighboring miRNAs and host genes. Baskerville S, Bartel DP. RNA 2005, 11(3):241-7. Baskerville Supplementary Data 1 Baskerville Supplementary Data 2

*A novel microarray approach reveals new tissue-specific signatures of known and predicted mammalian microRNAs. Beuvink I, Kolb FA, Budach W, Garnier A, Lange J, Natt F, Dengler U, Hall J, Filipowicz W, Weiler J. Nucleic Acids Res. (2007);35 e52. Beuvink Supplementary Data (*Supplementary data 2)

*Discovery of microRNAs and other small RNAs in solid tumors. Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E. Nucleic Acids Res 2010 May 18. Meiri Supplementary Data

*Novel rank-based statistical methods reveal microRNAs with differential expression in multiple cancer types. Navon R, Wang H, Steinfeld I, Tsalenko A, Ben-Dor A, Yakhini Z. PLoS One 2009 Nov 25;4(11):e8003. Navon Supplementary Data

*A custom micro-array platform for analysis of microRNA gene expression. Thomson JM, Parker J, Perou CM, Hammond SM. Nat Methods 2004, 1(1):47-53. Thomson Supplementary Data

*MicroRNA expression in zebrafish embryonic development. Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E, de Bruijn E, Horvitz HR, Kauppinen S, Plasterk RH. Science 2005 Jul 8;309(5732):310-1. Wienholds Supplementary Data


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